I am fairly new to PBS management, so I can't rule out some misconfiguration, 
but I have a strange issue when running Galaxy with the PBS job runner. It 
seems that munge spawns a bunch of defunct processes after running Galaxy on my 
cluster:

`ps axjf`:

    1 25992 25991 25991 ?           -1 Sl   77777   8:48 python 
./scripts/paster.py serve universe_wsgi.ini --daemon
25992 26032 25991 25991 ?           -1 Z    77777   0:00  \_ [munge] <defunct>
25992 26034 25991 25991 ?           -1 Z    77777   0:00  \_ [munge] <defunct>
25992 26036 25991 25991 ?           -1 Z    77777   0:00  \_ [munge] <defunct>

Now, these processes are being spawned by Galaxy, and I can't figure out why. 
Can anyone provide some insight or clues about where to start debugging this? 
Thanks,

Matt

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to