thank you for your contribution. I updated the toolshed version to 0.1.1
with your changes.
> Dear Galaxians,
> We are using Galaxy with RepeatMasker 3.3.0. I don't know whether that is
> the expected version, as I can't find any statement about what is required in
> the Galaxy tool dependencies for RepeatMasker.
> Anyway, when a job is submitted with no repeats, RepeatMasker 3.3.0 doesn't
> create the various output and summary files (.tbl, .out.gff, .out.html,
> .masked). This causes the Galaxy job to fail with an error message that
> scares the end user.
> I attach a patch to handle this case, by touch'ing these files before trying
> to copy them. Now such jobs succeed with empty output. I think this is
> clearer, and certainly less scary.
> Is there a better mechanism for me to contribute such fixes other than
> posting patches on this list?
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