This is indeed a bug, but fortunately there's a pull request that Björn Grüning 
submitted just recently that should fix it.  It's on my list of things to test 
and incorporate soon.

-Dannon

On Feb 11, 2013, at 6:09 PM, Thon de Boer <thondeb...@me.com> wrote:

> Hi,
>  
> It seems that the workflow editor does not know how to search for tools that 
> are in the toolshed…
> The regular toolsearch in the main Analysis window has no problem finding 
> “reorder Sam/BAM” in picard if I search there, but in the workflow editor it 
> seems to only be able to search for tools that are installed outside the 
> toolshed…
>  
> Do I need to turn this on somewhere or is this just a bug?
>  
> Thanks
>  
> Thon
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