Matthew,

This is related to the version of grep called by Galaxy.  GNU grep presents the 
issue while BSD grep works as expected.  I haven't really dug much, but this 
could probably be addressed by handling input parameters better in the tool 
wrapper, if you want to take a look.

-Dannon


On Feb 12, 2013, at 7:31 PM, Matthew Paul <mrp...@g.cofc.edu> wrote:

> Regarding this issue 
> (https://trello.com/card/filter-and-sort-select-tool-not-dealing-with-special-characters-right/506338ce32ae458f6d15e4b3/572):
> 
> No bug is apparent when using an up-to-date local instance of Galaxy (local 
> history on Trello card). However, when using the Galaxy public server the bug 
> is apparent (regular expressions are not registered). So we have come to a 
> few conjectures, 
> 
> 1) The bug has already been fixed in the newest version of Galaxy
> 
> or
> 
> 2) Somehow, instantiating the public server is the source of the error (which 
> is unlikely).
> 
> If one can elucidate any misconceptions (especially about the current version 
> of the Galaxy public server) that we may have that would be great. We would 
> like to resolve this bug.
> Thank You
> 
> 
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> 
>  http://lists.bx.psu.edu/


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to