On Feb 12, 2013, at 10:49 AM, Gaueko Erge wrote:

> Hi,
> 
> I have followed, carefully, the instructions posted 
> in:http://wiki.galaxyproject.org/Admin/Data%20Integration
> 
> Yet, despite my best efforts when I get, say all exons from hg19 build and 
> try to their fetch sequences, galaxy tells me that the sequences for hg19 are 
> not there
> 
> I find this surprising because I have downloaded:
> 
> rsync://datacache.g2.bx.psu.edu/indexes/
> rsync://hgdownload.cse.ucsc.edu/gbdb/
> rsync://hgdownload.cse.ucsc.edu/goldenPath/vicPac1/bigZips
> 
> databases and added the correct paths to the 'alignseq.loc' file

Hi Gaueko,

It'd be helpful if you could provide us with the entry from your alignseq.loc 
file.  Also, you may want to verify that your alignseq.loc contains only tabs 
between the fields, not spaces.

--nate

> 
> Any ideas will be appreciated
> 
> Thanks
> 
> --G
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> 
>  http://lists.bx.psu.edu/


___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to