I tried with many data but still the same problem and regarding settings I
haven't changed a thing of Tophat2. What might be causing this error?
On Wed, Feb 13, 2013 at 7:10 PM, Jeremy Goecks <jeremy.goe...@emory.edu>wrote:
> If the other outputs are fine, then the problem is likely with your data
> and/or your Tophat settings.
> Good luck,
> On Feb 13, 2013, at 8:22 AM, Sachit Adhikari wrote:
> Ok sorry. I did that, but the output of splice junctions is empty. The
> other outputs looks fine. What might be the problem?
> On Wed, Feb 13, 2013 at 1:20 PM, Jeremy Goecks <jeremy.goe...@emory.edu>wrote:
>> > Shall I replace:
>> > /orig/path/hg19 hg19 hg19
>> > with
>> > hg19 hg19 hg19 Homo_sapiens/UCSC/hg19/Sequence/Bowtie2Index
>> Yes, that's correct.
>> Finally, please email only galaxy-dev with questions about local
>> installations; galaxy-user is for questions about how to use Galaxy.
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