Hi all,

I have installed Deseq (by vipints) from the main galaxy toolshed and
have followed the make instructions but I'm still not unable to run it
inside Galaxy and I get the following error.

(Path is the path to our local galaxy instance)

error: get_read_counts:
Path/shed_tools/toolshed.g2.bx.psu.edu/repos/vipints/deseq_hts/2b3bb3348076/deseq_hts/deseq-hts_1.0/mex/get_reads.mex:
failed to load:
/mnt/all/cloudman/galaxy/clare/shed_tools/toolshed.g2.bx.psu.edu/repos/vipints/deseq_hts/2b3bb3348076/deseq_hts/deseq-hts_1.0/mex/get_reads.mex:
undefined symbol: bam_index_destroy
error: called from:
error:   
Path/shed_tools/toolshed.g2.bx.psu.edu/repos/vipints/deseq_hts/2b3bb3348076/deseq_hts/deseq-hts_1.0/src/get_read_counts.m
at line 97, column 34
starting Octave failed

I should add that I can run octave from command line and it seems to be working.

Any suggestions is much appreciated.

Thanks

Mahtab
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