I answered this in your previous email - here's the answer:
To make this work in the tool shed, make the static directory that contains the
image file a relative path in the tool config. For example, your repository
has the following structure:
The help section of your tool config should simply use a relative path to the
image file ( in this case, just a a "." in front of the path to the image file )
.. image:: ./static/images/count_modes.png
I believe that's all that is necessary.
Greg Von Kuster
On Mar 22, 2013, at 12:44 PM, Lance Parsons wrote:
> For one of my tool wrappers (htseq-count) in the toolshed, I point to an
> image file in the Help section. At the moment, I'm including the image in
> the repository as static/imagescount_modes.png and pointing to it in the
> wrapper.xml file with ".. image:: /static/images/count_modes.png". However,
> the toolshed installation doesn't copy this file to the static directory of
> the galaxy install (which doesn't seem like a good idea anyway). Is there
> any way for me to include a static file and then point to that file in the
> help when the tool is installed automatically via the toolshed.. Thanks.
> Lance Parsons - Scientific Programmer
> 134 Carl C. Icahn Laboratory
> Lewis-Sigler Institute for Integrative Genomics
> Princeton University
> Please keep all replies on the list by using "reply all"
> in your mail client. To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> To search Galaxy mailing lists use the unified search at:
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: