Peter,
You are correct, that is related to the issue described in the following
trello card:
https://trello.com/c/KdGX3hkh
We are looking into a fix for that behavior, and I'll keep you posted.
--Dave B.
On 4/23/13 10:11:59.000, Peter Cock wrote:
Hi all,
I'm seeing a unit test failure on the Tool Shed which I think is in
some way related to the blast_datatypes dependency not
refreshing the list of available file formats:
http://toolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr
Revision: 7:a7add03a44fd - blastxml_to_top_descr v0.0.6
Tool shed version: 9471:ae53deed05b6
Galaxy version: 9505:1e3d92ec22b2
Traceback (most recent call last):
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/test/functional/test_toolbox.py",
line 171, in test_tool
self.do_it( td, shed_tool_id=shed_tool_id )
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/test/functional/test_toolbox.py",
line 43, in do_it
shed_tool_id=shed_tool_id )
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/test/base/twilltestcase.py",
line 193, in upload_file
self.refresh_form( "file_type", ftype ) #Refresh, to support composite
files
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/test/base/twilltestcase.py",
line 1276, in refresh_form
tc.fv( f.name, control.name, value )
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/eggs/twill-0.9-py2.7.egg/twill/commands.py",
line 450, in formvalue
set_form_control_value(control, value)
File
"/var/opt/buildslaves/buildslave-ec2-1/buildbot-install-test-main-tool-shed-py27/build/eggs/twill-0.9-py2.7.egg/twill/utils.py",
line 190, in set_form_control_value
raise ClientForm.ItemNotFoundError('cannot find value/label "%s"
in list control' % (val,))
ItemNotFoundError: cannot find value/label "blastxml" in list control
This bug reminds me of something recently discussed on the
list, but I can't find the thread (perhaps it was another file format).
So there may already be a Trello issue open for this.
Thanks,
Peter
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