Hi, Our lab recently installed a local version of Galaxy on Mac OS X 10.8 and can access it at localhost:8080. Now we are trying to install Bowtie version 1 but need help getting it to work. At this point we do not see the tool listed on the left side of the Galaxy menu. Here are the exact steps we followed:
1. create directory /Users/administrator/galaxy-dist/tools_dependencies 2. in universe_wsgi.ini set tool_dependency_dir = tools_dependencies 3. in /etc/paths append /Users/administrator/galaxy-dist/tools_dependencies 4. create tools_dependencies/bowtie/1.0.0/bin 5. create symbolic link tools_dependencies/bowtie/default to directory in step 4 6. download Bowtie, extract it, and copy binaries to tools_dependencies/bowtie/1.0.0/bin Problem: Bowtie is still not appearing in menu on the left side of Galaxy Thanks! ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
