All, Let me try this again. My previous attempts have been bouncing.
I've succeeded in getting in getting the "display at UCSC main" link to display, but I'm getting a strange error when I'm redirected to the page. I can't cut-and-paste the error, so hopefully the attached screen shot wont get eaten by the mailing list. From the galaxy log, I'm seeing the UCSC viewer request data: 22.214.171.124 - - [13/Jun/2013:08:47:22 -0500] "GET /display_application/6505e875ddb66fd2/ucsc_bam/main/None/data/galaxy_6505e875ddb66fd2.bam HTTP/1.0" 200 1130428 "-" "genome.ucsc.edu/net.c" but I don't see anything like "6505e875ddb66fd2" under display applications: [galaxy@login002 ~]$ ls -l galaxy-dist/display_applications/ total 48 drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 ensembl drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 gbrowse drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 igb drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 igv drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 rviewer drwxr-xr-x 2 galaxy galaxy 8192 May 15 12:12 ucsc While the UCSC viewer is requesing data from the "display_application" subdirectory, I only have a "display_applications" subdirectory. I'm not seeing anything like "6505e875ddb66fd2" under galaxy-dist, so maybe I'm not doing some pre-processing needed before being redirected to UCSC? [galaxy@login002 ~]$ find galaxy-dist -name '*6505*' -print [galaxy@login002 ~]$ Any suggestions on what might be going wrong? Cheers, Malcolm -- Malcolm Tobias 314.362.1594
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/