Dear Developers,

I am using GATK for first time. I am doing Targeted reseq Analysis. while i
am running Unified Genotyper in Galaxy interface. it gives error message as
mentioned below..

"ERROR MESSAGE: The fasta file you specified (/tmp/tmp-gatk-WBrGTf) does
not exist."

But i places the Fasta file path in .loc file.

Also could anyone tell what are the preprocessing steps before using Bam
file for Unified Genotyper??

Your answers are very much Appericiated.


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