This is on the public instance. I can share my history with you right
On Mon, Jun 24, 2013 at 6:40 PM, Jennifer Jackson <j...@bx.psu.edu> wrote:
> Hi Andrew,
> Is this on a local instance or the public Main Galaxy instance at
> usegalaxy.org (https://main.g2.bx.psu.edu)?
> Also, the exact tools being used and the order is not clear. Maybe a step
> is missing from what is listed? (I am just guessing) If you are using the
> public Main instance, you can share a history with me and I can provide
> feedback. If this is on your instance, could you list the tools by name, in
> the order used, with key parameters (e.g. "Generate pileup from BAM
> dataset" with option 10-column pileup)?
> It sounds like there might be a mix-up about the file formats being used
> as inputs to tools. It may be something that can be resolved by reassigning
> the datatype or by adjusting the tool(s) used.
> Galaxy team
> On 6/24/13 1:10 PM, Andrew Guo wrote:
> After using tools to convert a SAM to a BAM file, I am trying to filter
> the BAM pileup. However, the filter BAM tool is not picking up on the
> dataset that I just created. It should show up under 10 column pileup, but
> an error message is saying "History does not include a dataset of the
> required format/build". Could you provide any insight into this?
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> Jennifer Hillman-Jackson
> Galaxy Support and Traininghttp://galaxyproject.org
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