Thank you for the info. In fact I was trying to convey that we as users
don't know which cluster to use ahead of time.
On Jul 12, 2013 5:17 PM, "Adam Brenner" <aebre...@uci.edu> wrote:

> > This is something our research group is interested in, but it's not
> possible
> > to specify which cluster the particular tool should run on ahead of time.
>
> Incorrect (at least to my knowledge). Using the new way jobs are
> handled within Galaxy via the XML[1] files you can send specific jobs
> to specific destinations which could be different "clusters."
>
> For our cluster, we handle the file uploading "tool" to a different
> job runner then the cluster (SGE). This was accomplished by
>
>     <tools>
>         <tool id="upload1" destination="local"/>
>     </tools>
>
> where id is the galaxy tool id and destination is where the tool
> should be ran, cluster, local, etc.
>
>
> [1] http://wiki.galaxyproject.org/Admin/Config/Jobs
>
> --
> Adam Brenner
> Computer Science, Undergraduate Student
> Donald Bren School of Information and Computer Sciences
>
> Research Computing Support
> Office of Information Technology
> http://www.oit.uci.edu/rcs/
>
> University of California, Irvine
> www.ics.uci.edu/~aebrenne/
> aebre...@uci.edu
>
>
> On Fri, Jul 12, 2013 at 11:42 AM, Saliya Ekanayake <esal...@gmail.com>
> wrote:
> > Hi,
> >
> > I see in documentation that Galaxy tools may be configured to run on a
> > cluster (http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster
> ).
> > This is something our research group is interested in, but it's not
> possible
> > to specify which cluster the particular tool should run on ahead of time.
> >
> > Therefore, is it possible to specify the cluster to run when the tool is
> > actually being used when composing the workflow from Galaxy?
> >
> > Thank you,
> > Saliya
> >
> > --
> > Saliya Ekanayake esal...@gmail.com
> > Cell 812-391-4914 Home 812-961-6383
> > http://saliya.org
> >
> > ___________________________________________________________
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