On Aug 8, 2013, at 9:48 AM, Auerbach, Kenneth R. wrote: > Hello, > > Could anyone tell me if there are detailed instructions anywhere for setting > up Galaxy on a Linux cluster using an LSF scheduler? > > Thank you.
Hi, There aren't any instructions specific to LSF because we simply interface with it using the DRMAA runner, like we do for PBS Pro and Grid Engine. You do need to install FedStage DRMAA for LSF since Platform doesn't (didn't?) ship a DRMAA library with LSF: http://sourceforge.net/projects/lsf-drmaa/ >From there, you can follow the instructions in the cluster/job documentation: http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster http://wiki.galaxyproject.org/Admin/Config/Jobs General documentation on setting up a "production" Galaxy system can be found at: http://usegalaxy.org/production --nate > > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/