Hi Greg, I'm seeing something strange on a system running the August stable release of galaxy-dist,
$ sudo -u galaxy hg head changeset: 10393:d05bf67aefa6 branch: stable tag: tip user: Nate Coraor <n...@bx.psu.edu> date: Mon Aug 12 11:55:41 2013 -0400 summary: Added tag release_2013.08.12 for changeset 1ae95b3aa98d changeset: 10390:009088d5e76f user: Ross Lazarus <ross.laza...@gmail.com> date: Sat Aug 10 11:28:28 2013 +1000 summary: Patch for missing options in FromDataTableOutputActionOption when these are used in an output filter 1. Run Galaxy 2. Log in as an administrator 3. Click on Admin (top menu) 4. Click on "Manage installed tool shed repositories" (left menu) 5. Observe duplicate entries: Names of repositories for which updates are available are highlighted in yellow. Description Owner Revision Installation Status Tool shed Galaxy wrappers for Emboss version 5.0.0 tools devteam c159a6ded912 Installed toolshed.g2.bx.psu.edu Galaxy applicable data formats used by Emboss tools. devteam a89163f31369 Installed toolshed.g2.bx.psu.edu Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses. bgruening b1ad88bbc5fa Installed toolshed.g2.bx.psu.edu Gene calling with glimmer and a trainingset of know genes. bgruening 22bfc027a718 Installed toolshed.g2.bx.psu.edu Contains a tool dependency definition that downloads and compiles version 1.61 of the biopython package. biopython b482933a6de5 Installed toolshed.g2.bx.psu.edu NCBI BLAST+ 2.2.26 (binaries only) iuc c85236cd100d Installed testtoolshed.g2.bx.psu.edu NCBI BLAST+ 2.2.26 (binaries only) iuc 9ff9bfdcd04f New testtoolshed.g2.bx.psu.edu NCBI BLAST+ 2.2.26 (binaries only) iuc 0e536576294c New testtoolshed.g2.bx.psu.edu Contains a tool dependency definition that downloads and compiles version 2.4 of the freetype font library. iuc 8761091302c4 Installed toolshed.g2.bx.psu.edu Contains a tool dependency definition that downloads and compiles version 1.7 of the the python numpy package iuc 74c21f9bdc39 Installed toolshed.g2.bx.psu.edu As you can see I have been trying the NCBI BLAST+ package from the TEST tool shed, http://testtoolshed.g2.bx.psu.edu/view/iuc/package_blast_plus_2_2_26 Why are there these extra entries (older revisions) labelled with an "Installation Status" of "New"? Are they relics from failed installation attempts? Thanks, Peter
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