Hello Bjoern,

This is a strange error which I have not been able to reprioduce.  However, 
I've committed a fix that I believe will keep it from reoccurring in changeset 
10411:c42567f43aa7.  Thanks for reportin ghtis and please let me know if my fix 
does not resolve it.

Thanks!

Greg Von Kuster


On Aug 15, 2013, at 5:21 AM, Bjoern Gruening <bjoern.gruen...@gmail.com> wrote:

> Hi,
> 
> back for testing and migrating to the tool shed. Sorry in advance!
> 
> During installation via the API I'm usually watching the status with 'Manage 
> installed tool shed repositories'. 
> Installation is still running but I now get these error:
> 
> URL: http://localhost:8080/admin_toolshed/browse_repositories
> File 
> '/home/gruening/projects/code/galaxy-central/eggs/WebError-0.8a-py2.7.egg/weberror/evalexception/middleware.py',
>  line 364 in respond
>   app_iter = self.application(environ, detect_start_response)
> File '/usr/lib/python2.7/site-packages/paste/recursive.py', line 84 in 
> __call__
>   return self.application(environ, start_response)
> File '/usr/lib/python2.7/site-packages/paste/httpexceptions.py', line 633 in 
> __call__
>   return self.application(environ, start_response)
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/base.py',
>  line 132 in __call__
>   return self.handle_request( environ, start_response )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/base.py',
>  line 190 in handle_request
>   body = method( trans, **kwargs )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/__init__.py',
>  line 221 in decorator
>   return func( self, trans, *args, **kwargs )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/webapps/galaxy/controllers/admin_toolshed.py',
>  line 151 in browse_repositories
>   return self.installed_repository_grid( trans, **kwd )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/helpers/grids.py',
>  line 288 in __call__
>   kwargs=kwargs )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/__init__.py',
>  line 990 in fill_template
>   return self.fill_template_mako( filename, **kwargs )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/web/framework/__init__.py',
>  line 1005 in fill_template_mako
>   return template.render( **data )
> File 
> '/home/gruening/projects/code/galaxy-central/eggs/Mako-0.4.1-py2.7.egg/mako/template.py',
>  line 296 in render
>   return runtime._render(self, self.callable_, args, data)
> File 
> '/home/gruening/projects/code/galaxy-central/eggs/Mako-0.4.1-py2.7.egg/mako/runtime.py',
>  line 660 in _render
>   **_kwargs_for_callable(callable_, data))
> File 
> '/home/gruening/projects/code/galaxy-central/eggs/Mako-0.4.1-py2.7.egg/mako/runtime.py',
>  line 692 in _render_context
>   _exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
> File 
> '/home/gruening/projects/code/galaxy-central/eggs/Mako-0.4.1-py2.7.egg/mako/runtime.py',
>  line 718 in _exec_template
>   callable_(context, *args, **kwargs)
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/base.mako.py',
>  line 42 in render_body
>   __M_writer(unicode(next.body()))
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 127 in render_body
>   __M_writer(unicode(self.grid_body( grid )))
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 747 in render_grid_body
>   __M_writer(unicode(self.make_grid( grid )))
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 777 in render_make_grid
>   __M_writer(unicode(self.render_grid_table( grid, show_item_checkboxes )))
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 724 in render_render_grid_table
>   __M_writer(unicode(render_grid_table_body_contents( grid, 
> show_item_checkboxes )))
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 627 in render_grid_table_body_contents
>   return 
> render_render_grid_table_body_contents(context,grid,show_item_checkboxes)
> File 
> '/home/gruening/projects/code/galaxy-central/database/compiled_templates/grid_base.mako.py',
>  line 335 in render_render_grid_table_body_contents
>   value = column.get_value( trans, grid, item )
> File 
> '/home/gruening/projects/code/galaxy-central/lib/tool_shed/galaxy_install/grids/admin_toolshed_grids.py',
>  line 58 in get_value
>   if tool_shed_repository.missing_repository_dependencies:
> File 
> '/home/gruening/projects/code/galaxy-central/lib/galaxy/model/__init__.py', 
> line 3566 in missing_repository_dependencies
>   if required_repository.status not in [ self.installation_status.INSTALLED ]:
> AttributeError: 'NoneType' object has no attribute 'status'
> 
> Cheers,
> Bjoern
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>  http://lists.bx.psu.edu/
> 
> To search Galaxy mailing lists use the unified search at:
>  http://galaxyproject.org/search/mailinglists/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to