Hi all

I installed bismark from the toolshed (bgruening) with all dependencies
having been installed successfully and I generated the genomes according to
the instructions.

While trying to test the tool I got the following error.

galaxy.jobs.handler ERROR 2013-09-04 13:14:26,267 Failed to generate job
destination
Traceback (most recent call last):
  File
"/steno-internal/projects/galaxy/galaxy-dist/lib/galaxy/jobs/handler.py",
line 287, in __check_if_ready_to_run
    self.job_wrappers[job.id].job_destination
  File
"/steno-internal/projects/galaxy/galaxy-dist/lib/galaxy/jobs/__init__.py",
line 617, in job_destination
    return self.job_runner_mapper.get_job_destination(self.params)
  File
"/steno-internal/projects/galaxy/galaxy-dist/lib/galaxy/jobs/mapper.py",
line 163, in get_job_destination
    self.__cache_job_destination( params )
  File
"/steno-internal/projects/galaxy/galaxy-dist/lib/galaxy/jobs/mapper.py",
line 148, in __cache_job_destination
    raw_job_destination = self.job_wrapper.tool.get_job_destination( params
)
AttributeError: 'NoneType' object has no attribute 'get_job_destination'
galaxy.datatypes.metadata DEBUG 2013-09-04 13:14:26,905 Cleaning up
external metadata files
galaxy.jobs.handler ERROR 2013-09-04 13:14:27,034 (1316) Error checking job
readiness

I'm using the old style job configuration (the one in universe_wsgi.ini).
Could that be the issue?

Bests,
Nikos
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