Hello Pieter, Please send questions like this to the galaxy-...@bx.psu.edu or firstname.lastname@example.org mailing list rather than individual email addresses to ensure optimal, timely responses.
The Tool Shed wiki contains all of the information you need: http://wiki.galaxyproject.org/Tool%20Shed This page provides a nice overview of repository features: http://wiki.galaxyproject.org/ToolShedRepositoryFeatures See additional specific pages below for each item you've listed: On Sep 11, 2013, at 11:52 AM, "Lukasse, Pieter" <pieter.luka...@wur.nl> wrote: > Hi Greg, > > I want to make a toolshed package with the following contents: The above "package" is actually a mercurial repository in the tool shed. > · A number of tools The following pages will provide all of the information you'll need for building Galaxy tools for the Tool Shed. http://wiki.galaxyproject.org/ToolShedToolFeatures > · Some workflows The following pages provide information for enabling workflow sharing via the Tool Shed. http://wiki.galaxyproject.org/ToolShedWorkflowSharing > · Datatypes Datatype features in the Tool Shed are described in the following pages: http://wiki.galaxyproject.org/ToolShedDatatypesFeatures > · Installation configurations for installing external tools like R, > Gnuplot and X!Tandem The above information is document in the "ToolShedToolFeatures" section of the wiki, specifically in the following pages: http://wiki.galaxyproject.org/ToolShedToolFeatures#Automatic_third-party_tool_dependency_installation_and_compilation_with_installed_repositories > · Dependencies configurations to other packages If by "packages", you are referring to other tool shed repositories, then the documentation describing defining these relationships is located in the following pages: http://wiki.galaxyproject.org/DefiningRepositoryDependencies > > Is there a HOWTO wiki page where I can find exactly which files I should add > to the .zip file and how they should be named? Or maybe an example package > which I could use? > > Regards, > > Pieter Lukasse > > Wageningen UR, Plant Research International > > Departments of Bioscience and Bioinformatics > > Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, > Wageningen, the Netherlands > > +31-317480891; skype: pieter.lukasse.wur > > http://www.pri.wur.nl > >
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