that is currently not supported. I think there is somewhere a trello
card about that problem. One idea was to give each repository a hint
where to install the tools (maybe be a small tool_conf.xml). Maybe you
have a better idea?
Currently you can try to manipulate the integrated_tool_panel.xml file,
but that file can be overwritten at certain points. It is regenerated
from all of your used tool_conf files.
Hope that helps,
> Hello guys,
> After porting our Galaxy tools into a tool shed repository the tool
> sections got lost. I know there is a possibility to assign a
> repository to a section inside the tools panel when the repository is
> getting installed. However, we would still like to have sections
> inside the repository – that makes navigating the tools much neater.
> Also, the way shed_tool_conf.xml is populated with tools during
> repository installation seems arbitrary to me. Is there any way to
> control this, to have repository tools sorted/displayed in a certain
> order in Tools panel, in the very least, alphabetically? I’ve got many
> tools in my repository (and no, it is not possible to divide them into
> several repositories), and the way they are sorted or divided into
> sections makes navigating the tools much easier for a user.
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in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: