Hello,

It looks like the default wrapper that comes with Galaxy for Tophat2 and
Bowtie2 does not include options for selecting how many threads/cores to
use. Is there an easy way to get this feature in the wrappers or do I
simply need to add it to the wrapper code? I

Alternatively, does anyone know of tested/debugged wrappers for
Tophat2/Bowtie2 that have this feature built in?

Thank you,
Richard
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