I have had two RNAseq files in queue to map with Top hat in Galaxy Main
since last Thursday (History began Sept 19). Yesterday I got word that NGS
was stalled, my jobs were mistakenly believed to be moving afterwards when
but are now under review again. This morning the 2 mapping jobs are still
waiting to run. I have a data review meeting this thursday and hope you can
advise me on contingency plans to get these 2 mapping jobs running.
Can you tell me whether I should delete the jobs and re-run them as new?
My concern is that they are still "believed to be moving" as was indicated
by one of your galaxy stewards, but are actually still stalled in space.
I have a data meeting Thursday (10/4) and hoped to be ready by starting
this project Sept 19th.
Can you tell me if you are aware of another public Galaxy server (other
than Main) with 'Top Hat' for mapping RNAseq data? I joined Cistrome
(Harvard) but they only have Cufflinks (for previously mapped RNAseq
below is my history
thank you very much for your help
Theresa Ryan Stueve
510-225-8894 (text better than voicemail for quick response)
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