Perhaps it has something to do with a specific account? The user
'nilesh' tried to add me to his rseqc repository
(http://toolshed.g2.bx.psu.edu/view/nilesh/rseqc ) and got a Server
Error. I then created the rseqc_dev3 repository
(http://testtoolshed.g2.bx.psu.edu/view/lparsons/rseqc_dev3 )on the
testtoolshed and tried to add him (nilesh) and got the error indicated
below. Any help in tracking this down would be appreciated.
Björn Grüning wrote:
Hi Lance,
I worked for me the last time. I usually create a repository under the
IUC account and add me as contributor. No problem so far.
Cheers,
Bjoern
I'm having some difficulty collaborating on a tool development in the
toolshed. It seems to happen on the production toolshed as well as the
testtoolshed. When I try to grant another user the ability to update a
repository (or when the other person tries to add me) we get the
following error:
URL:
http://testtoolshed.g2.bx.psu.edu/repository/manage_repository?id=f49c56ded06bdcd9
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/web/framework/middleware/error.py',
line 149 in __call__
app_iter = self.application(environ, sr_checker)
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/eggs/Paste-1.7.5.1-py2.7.egg/paste/debug/prints.py',
line 106 in __call__
environ, self.app)
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/eggs/Paste-1.7.5.1-py2.7.egg/paste/wsgilib.py',
line 543 in intercept_output
app_iter = application(environ, replacement_start_response)
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py',
line 84 in __call__
return self.application(environ, start_response)
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py',
line 633 in __call__
return self.application(environ, start_response)
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/web/framework/base.py',
line 132 in __call__
return self.handle_request( environ, start_response )
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/web/framework/base.py',
line 190 in handle_request
body = method( trans, **kwargs )
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/web/framework/__init__.py',
line 98 in decorator
return func( self, trans, *args, **kwargs )
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/webapps/tool_shed/controllers/repository.py',
line 2124 in manage_repository
user = trans.sa_session.query( trans.model.User ).get(
trans.security.decode_id( user_id ) )
File
'/var/opt/galaxy/g2cmnty/galaxy_testtoolshed/lib/galaxy/web/security/__init__.py',
line 60 in decode_id
return int( self.id_cipher.decrypt( obj_id.decode( 'hex' ) ).lstrip(
"!" ) )
File '/usr/lib/python2.7/encodings/hex_codec.py', line 42 in hex_decode
output = binascii.a2b_hex(input)
TypeError: Non-hexadecimal digit found
Can anyone else successfully grant a user update permission to a
repository? I've submitted an issue on Trello
(https://trello.com/c/XYkqW3Lr).
--
Lance Parsons - Scientific Programmer
134 Carl C. Icahn Laboratory
Lewis-Sigler Institute for Integrative Genomics
Princeton University
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