Hello Peter,

I've created teh following Trello card for this:

https://trello.com/c/Vg12cS7o/1174-toolshed-frames-issue-with-readme-file-links

Thanks,

Greg Von Kuster


On Oct 8, 2013, at 10:44 AM, Peter Cock <p.j.a.c...@googlemail.com> wrote:

> Consider the following sequence:
> 
> 1. Goto http://toolshed.g2.bx.psu.edu/view/bgruening/interproscan
> 
> 2. The README file explains this is for InterProScan 4, and has
> a link to http://toolshed.g2.bx.psu.edu/view/bgruening/interproscan5
> for Bjoern's InterProScan 45 wrapper.
> 
> 3. Click the link for InterProScan 5.
> 
> 4. Notice the link opened within the frame, and you now have a
> nested tool shed menu.
> 
> 5. Click on the link to InterPro itself,
> http://www.ebi.ac.uk/interpro/interproscan.html
> 
> 6. Notice the double nested frame remains, and now the InterPro
> page is squeezed into the bottom left.
> 
> -----
> 
> This isn't specific to these repositories, e.g.
> 
> 1. Goto http://testtoolshed.g2.bx.psu.edu/view/peterjc/blast2go
> 
> 2. The README file introduction refers to the tool being available
> on the main tool shed,
> 
> "It is available from the Galaxy Tool Shed at:
> http://toolshed.g2.bx.psu.edu/view/peterjc/blast2go "
> 
> 3. Click on that link
> 
> 4. Observe a double nested tool shed interface, with the Test
> Tool Shed at the top, and the Main Tool Shed nested within.
> 
> -----
> 
> Suggested fix: All links within Tool Shed README files should be
> modified to open full frame by adding target="_top" to them.
> 
> Peter
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