(cc-ing the list)
I'm more interested in the merging part, and after a quick search on the
toolshed, there are no tools to merge reads. Seems that there is a need for a
read merger wrapper then...
On 14 Oct 2013, at 13:46 , "Langhorst, Brad" <langho...@neb.com> wrote:
> I would also like to see a seqprep wrapper…
> if you need something sooner, cutdadapt is already wrapped and i'm pretty
> sure there is an existing tool to merge reads as well.
> Brad Langhorst
> Applications and Product Development Scientist
> On Oct 14, 2013, at 6:59 AM, Lionel Guy <guy.lio...@gmail.com>
>> I'm interested in a wrapper for SeqPrep:
>> Anyone preparing one/aware of someone preparing one? Otherwise I'll put one
>> From its description: "SeqPrep is a program to merge paired end Illumina
>> reads that are overlapping into a single longer read. It may also just be
>> used for its adapter trimming feature without doing any paired end overlap."
>> Lionel Guy
>> Uppsala University
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