On Thu, Oct 17, 2013 at 10:53 AM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> Hi John,
>
> Is all your semi-colon fixing on the trunk? I've found another bug in
> this area (patch below), which is showing up with task splitting under
> SGE.
>
> ...
>
> Note the repeated semi-colon, which causes the child jobs to fail (patch 
> below).
>
> There is however a second bug, the merge fails yet the history entry
> is still green (success). The merge method is raising a ValueError yet
> it is being ignored.

That bug detecting failiures be a symptom of something more general,
I've just had a split-BLAST job return this as stderr, yet the history entry
is green: Job output not returned from cluster

Peter
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to