Its an x86_64 Darwin
On Dec 20, 2013, at 8:55 AM, Dave Bouvier <d...@bx.psu.edu> wrote:
> To assist tracking down this issue, could you provide the output of the
> following commands?
> uname -m
> uname -s
> --Dave B.
> On 12/20/2013 08:43 AM, UMD Bioinformatics wrote:
>> Hello Devteam,
>> I’ve just updated my local instance to the latest version. With the
>> migration of tools to the tool shed I used the migrate command to keep my
>> tools as they were in the previous versions.
>> $ sh ./scripts/migrate_tools/0008_tools.sh install_dependencies
>> and I’ve updated the database to 117
>> $ sh manage_db.sh upgrade
>> However, when I’m using samtools I’m getting an error related to the data.
>> I’m not sure what the issue is and I’ve check all the .loc and .sh files and
>> everything is pointing to the proper locations. Any ideas what the issue
>> might be?
>> An error occurred with this dataset:Could not determine Samtools version
>> /bin/sh: line 1: 1616 Segmentation fault: 11 samtools 2>&1 Error extracting
>> alignments from (/galaxy-dist/database/files/001/dataset_1585.dat),
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Please keep all replies on the list by using "reply all"
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and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: