Hi all,
LWR sounds very attractive and promising. However how to program on
galaxy side to utilize LWR server is not thoroughly documented. I have several
questions to ask:
1. I separate the tool wrappers (.xml) and the applications (.pl, .py
etc) in two different folders. In the traditional way it works fine. When I use
the legacy way of using LWR (adding galaxy:tool_runners section in the
universal_wsgi.ini file), the error message says that the application cannot be
found. Does the executable have to be in the same folder with the wrapper?
2. In the thread
http://dev.list.galaxyproject.org/Managing-Data-Locality-td4662438.html#a4662570
John only mentioned $GALAXY_ROOT/databases/files, does this mean that the
dynamic multiple output is not supported as it uses $GALAXY_ROOT/databases/tmp
folder?
3. What types of files are supposed to be stored under tools directory
(tool_files), working directory (working), inputs (inputs), configs directory
(configs), all of which are subfolders of
${staging_directory}/${job_identifier}?
4. Is there file size limit on the LWR server?
Best regards!
Jun
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