On Fri, Apr 11, 2014 at 5:29 PM, Daniel Blankenberg <d...@bx.psu.edu> wrote:
> Hi Peter,
> Looks like you are missing the -data_managers flag, try this:
> run_functional_tests.sh -data_managers -id data_manager_blast_db
> Let us know if you encounter more issues.
> Thanks,
> Dan

Thank you! That was my silly mistake, it was clearly stated here:

However, adding the switch seems to prevent testing traditional
tools at the same time - is that deliberate? e.g.

Also note the test fails which I suspect is due to the database
changing slightly? Mike is proposing to switch to a regex based
test out the output JSON files for this tool...

$ ./run_functional_tests.sh -data_managers -id data_manager_blast_db
base.twilltestcase: DEBUG: Files diff for
'/mnt/galaxy/galaxy-central/test-data/est_out.json' vs
base.twilltestcase: INFO: ## files diff on
/mnt/galaxy/galaxy-central/test-data/est_out.json and
lines_diff=0, found diff = 2
--------------------- >> end captured logging << ---------------------

Ran 1 test in 24.030s

FAILED (failures=1)


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