When I pass a parameter on the command line certain characters (like @) are transformed to X+hexadecimal. Is this some sort of sanitization step? Would using a config file ( https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.3Cconfigfile.3E_tag_set) avoid that sort of mess?
I'm not sure I've seen this documented (I could be wrong though). Thanks, Jim
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