When I pass a parameter on the command line certain characters (like @) are
transformed to X+hexadecimal. Is this some sort of sanitization step? Would
using a config file (
https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.3Cconfigfile.3E_tag_set)
avoid that sort of mess?

I'm not sure I've seen this documented (I could be wrong though).

Thanks,
Jim
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