Hey Nikos,

I think you're seeing the same issue from this trello card here:
https://trello.com/c/HWuxsftB/1596-fetching-zip-safe-eggs-that-depend-on-other-eggs-will-fail

Can you run `python scripts/fetch_eggs.py` from your galaxy directory?
 That should re-fetch galaxy's eggs and you should be up and running again.


On Wed, Jun 4, 2014 at 9:15 AM, Nikos Sidiropoulos <nikos.sid...@gmail.com>
wrote:

> Hi all,
>
> after the latest galaxy update I've experienced the following error while
> trying to start the server.
>
> galaxy.eggs DEBUG 2014-06-04 14:34:56,027 Fetched
> http://eggs.galaxyproject.org/bioblend/bioblend-0.4.2-py2.7.egg
> galaxy.eggs ERROR 2014-06-04 14:34:56,047 One of Galaxy's managed eggs
> depends on something which is missing, this is almost certainly a bug in t
> he egg distribution.
> galaxy.eggs ERROR 2014-06-04 14:34:56,047 Dependency "bioblend" requires
> "mock"
> Traceback (most recent call last):
>   File "./scripts/paster.py", line 33, in <module>
>     serve.run()
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 1049, in run
>     invoke(command, command_name, options, args[1:])
>   File "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util
> /pastescript/serve.py", line 1055, in invoke
>     exit_code = runner.run(args)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 220, in run
>     result = self.command()
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 643, in command
>     app = loadapp( app_spec, name=app_name, relative_to=base,
> global_conf=vars)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
> line 350, in loadapp
>     return loadobj(APP, uri, name=name, **kw)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
> line 375, in loadobj
>     return context.create()
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
> line 813, in create
>     return self.object_type.invoke(self)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
> line 249, in invoke
>     return fix_call(context.object, context.global_conf,
> **context.local_conf)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py",
> line 97, in fix_call
>     val = callable(*args, **kw)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py",
> line 49, in app_factory
>     webapp.add_ui_controllers( 'galaxy.webapps.galaxy.controllers', app )
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/web/framework/__init__.py",
> line 441, in add_ui_controllers
>     module = import_module( module_name )
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/util/backports/importlib/__init__.py",
> line 37, in import_module
>     __import__(name)
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/cloudlaunch.py",
> line 20, in <module>
>     eggs.require('bioblend')
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/eggs/__init__.py",
> line 409, in require
>     return c[req.project_name].require()
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/eggs/__init__.py",
> line 237, in require
>     dists = self.resolve()
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/galaxy/eggs/__init__.py",
> line 168, in resolve
>     dists = pkg_resources.working_set.resolve( (
> self.distribution.as_requirement(), ), env, self.fetch )
>   File
> "/steno-internal/projects/galaxy-test/galaxy-dist/lib/pkg_resources.py",
> line 569, in resolve
>     raise VersionConflict(dist,req) # XXX put more info here
> pkg_resources.VersionConflict: (bioblend 0.4.2
> (/steno-internal/projects/galaxy-test/galaxy-dist/eggs/bioblend-0.4.2-py2.7.egg),
> Requirement.parse('mock'))
>
>
> First I got and error about the python module 'requests' missing, fixed it
> using 'pip install', and then got the error above.
>
> Regards,
> Nikos
>
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