I'm suddenly getting this error today when I tried to restart Galaxy:

Starting galaxy...
Some eggs are out of date, attempting to fetch...
Warning: setuptools (a dependent egg of sqlalchemy-migrate) cannot be fetched
Fetched http://eggs.galaxyproject.org/bioblend/bioblend-0.4.2-py2.7.egg
One of Galaxy's managed eggs depends on something which is missing, this is 
almost certainly a bug in the egg distribution.
Dependency "bioblend" requires "pyyaml"
Traceback (most recent call last):
  File "./scripts/fetch_eggs.py", line 37, in <module>
    c.resolve() # Only fetch eggs required by the config
  File "/ifs/user/galaxy/galaxy-dist/lib/galaxy/eggs/__init__.py", line 345, in 
  File "/ifs/user/galaxy/galaxy-dist/lib/galaxy/eggs/__init__.py", line 168, in 
    dists = pkg_resources.working_set.resolve( ( 
self.distribution.as_requirement(), ), env, self.fetch )
  File "/ifs/user/galaxy/galaxy-dist/lib/pkg_resources.py", line 569, in resolve
    raise VersionConflict(dist,req) # XXX put more info here
pkg_resources.VersionConflict: (bioblend 0.4.2 

pyyaml is installed and I haven't updated anything that would cause a conflict. 
 What do I do to fix this?


Dori Sajdak
Senior Systems Administrator
State University of NY at Buffalo
Center for Computational Research
701 Ellicott St
Buffalo, NY 14203
Phone: (716) 881-8934
Fax: (716) 849-6656
Web: http://ccr.buffalo.edu

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