I had a similar issue a while ago. Greg mentioned the following setting
in universe:
# Enable use of an in-memory registry with bi-directional relationships
# between repositories (i.e., in addition to lists of dependencies for a
# repository, keep an in-memory registry of dependent items for each
repository.
#manage_dependency_relationships = True
Setting this to false made the delay go away. I haven't had issues so
far after disabling.
See here for details:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2014-March/018821.html
Best,
Geert
On 08/05/2014 09:01 PM, Dannon Baker wrote:
There's definitely a request that will occasionally block at startup
-- I've hit this before too, Martin. Looking into it now.
On Tue, Aug 5, 2014 at 2:59 PM, Martin Čech <mar...@bx.psu.edu
<mailto:mar...@bx.psu.edu>> wrote:
I just freshly cloned galaxy-central, switched to next-stable and
did initial startup - no problems detected and Galaxy booted in
under 2m.
On Tue, Aug 5, 2014 at 2:54 PM, Langhorst, Brad <langho...@neb.com
<mailto:langho...@neb.com>> wrote:
I’ve noticed that startup is very slow.
It’s about 15 minutes for me to stop and restart my 4 daemons.
It was much faster with galaxy on local storage.
brad
--
Bradley W. Langhorst, Ph.D.
Applications and Product Development Scientist
On Aug 5, 2014, at 2:41 PM, Björn Grüning
<bjoern.gruen...@gmail.com <mailto:bjoern.gruen...@gmail.com>>
wrote:
Hi all,
does anyone encountered a long start-up delay with the recent
next-stable and starting a instance from scratch?
For me its hanging at:
tool_shed.galaxy_install.migrate.check DEBUG 2014-08-05
18:39:45,207 psycopg2 egg successfully loaded for postgres
dialect
for 3-5 minutes.
Cheers,
Bjoern
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--
Geert Vandeweyer, Ph.D.
Department of Medical Genetics
University of Antwerp
Prins Boudewijnlaan 43
2650 Edegem
Belgium
Tel: +32 (0)3 275 97 56
E-mail: geert.vandewe...@ua.ac.be
http://ua.ac.be/cognitivegenetics
http://www.linkedin.com/in/geertvandeweyer
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