Hey Tony,

Thanks for the error report.  I'll look into this, but you can try two
things really quickly to see if you can get galaxy started:

1) python scripts/fetch_eggs.py may fix up your egg situation
2) just delete the eggs folder of your galaxy distribution
(<galaxy-dist>/eggs) and start galaxy again.  It'll automatically fetch
everything it needs.

-Dannon


On Tue, Aug 12, 2014 at 3:13 PM, Tony Kusalik <kusa...@cs.usask.ca> wrote:

> Hi,
>
> I installed the latest set of changes to Galaxy, and now the Galaxy server
> will not start up.  I am hoping someone can point me to the source of the
> problem and/or a fix.
>
> This morning my Galaxy server was running just fine.  I did a
>   hg incoming
> and was told that a fair number of changes were waiting to be applied,
> changeset 13772 through changeset 14309.  Fine.  I did
>   hg pull -u
> and got
>   searching for changes
>   adding changesets
>   adding manifests
>   adding file changes
>   added 538 changesets with 1738 changes to 542 files
>   473 files updated, 0 files merged, 152 files removed, 0 files unresolved
> Fine.
> However, now my Galaxy server will not start up and run.  On
>   sh run.sh --daemon
> the server dies with the following produced in paster.log
> where /birl2/Galaxy/galaxy-dist is the name of the installation
> directory.
>
> -- begin paster.log --
>
> Traceback (most recent call last):
>   File "./scripts/paster.py", line 33, in <module>
>     serve.run()
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 10
> 49, in run
>     invoke(command, command_name, options, args[1:])
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 10
> 55, in invoke
>     exit_code = runner.run(args)
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 22
> 0, in run
>     result = self.command()
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/serve.py",
> line 64
> 3, in command
>     app = loadapp( app_spec, name=app_name, relative_to=base,
> global_conf=vars)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  350, in loadapp
>     return loadobj(APP, uri, name=name, **kw)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  374, in loadobj
>     global_conf=global_conf)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  399, in loadcontext
>     global_conf=global_conf)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  423, in _loadconfig
>     return loader.get_context(object_type, name, global_conf)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  561, in get_context
>     section)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  620, in _context_from_explicit
>     value = import_string(found_expr)
>   File
> "/birl2/Galaxy/galaxy-dist/lib/galaxy/util/pastescript/loadwsgi.py", line
>  125, in import_string
>     return pkg_resources.EntryPoint.parse("x=" + s).load(False)
>   File "/birl2/Galaxy/galaxy-dist/lib/pkg_resources.py", line 1954, in load
>     entry = __import__(self.module_name, globals(),globals(), ['__name__'])
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/web/__init__.py", line 4, in
> <modul
> e>
>     from framework import expose
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py",
> line 48
> , in <module>
>     eggs.require( "amqp" )
>   File "/birl2/Galaxy/galaxy-dist/lib/galaxy/eggs/__init__.py", line 414,
> in req
> uire
>     raise EggNotFetchable( str( [ egg.name for egg in e.eggs ] ) )
> galaxy.eggs.EggNotFetchable: ['amqp']
> Removing PID file paster.pid
>
> -- end paster.log --
>
> The above is the complete content of paster.log.
>
> Anyone have any idea what the problem is?  More importantly, how do I fix
> the problem
> and get Galaxy running again?
>
>
>
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