Am 19.01.2015 um 17:43 schrieb Evan Bollig PhD:
> Hey Bjoern,
> I'm playing with your docker recipes
> (https://github.com/bgruening/docker-recipes) today and I've been
> waiting for the galaxyp image build to complete for about 3 hours. For
> the majority of that time it has been stuck on
> RUN install-repository "--url http://testtoolshed.g2.bx.psu.edu/ -o
> bgruening --name package_openms_latest"
The Tool Shed was down today, maybe this was a reason?
> What is the typical build time you experience? Any thoughts on how
> this could have gone wrong?
This is a good question. OpenMS is a beast. It can take several hours.
On one of my computers I needed to add:
threadpool_kill_thread_limit = 31600
threadpool_hung_thread_limit = 20000
to the galaxy.ini to not get a timeout during installations. Maybe you
can add this as well?
> -Evan Bollig
> Research Associate | Application Developer | User Support Consultant
> Minnesota Supercomputing Institute
> 599 Walter Library
> 612 624 1447
> Please keep all replies on the list by using "reply all"
> in your mail client. To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
> To search Galaxy mailing lists use the unified search at:
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: