On Tue, Mar 3, 2015 at 5:32 PM, Dooley, Damion <damion.doo...@bccdc.ca> wrote:
> Ok, thanks Peter for the detailed feedback, change recommendations,
> and your work detailing all the NCBI Blast fields and quirks over time!
>
> The columns 25 and 26 stem from my predecessor's version of the
> code which predates blast 2.28 I think (he had to create sallseqdescr
> from scratch).

That makes sense. It was why I originally wrote this separate tool
which I guess shared similar motivation to your blast_reporting tool,
https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr

> I hadn't been paying any mind to how they fit in anywhere else in the
> last few years, but now that its being shared ... ! .  I'll take a close
> look at this, and nip the divergence in the bud so to speak - staying
> sync'd with your efforts is a plus.  I think the changes you mention
> will be fine for operations here.  (I'll have to see if sallseqdescr
> derived from XML hit titles is same as tabular salltitles).

Great :)

> Hmm, README.md is in github markdown variant so I'll see whats
> tripping up there.
>
> Thanks,
>
> Damion

I'm hoping http://commonmark.org gets sorted out soon and everyone
can switch over to that rather than competing markdown variants.

Peter
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to