It looks like it doesn't work in galaxy main either.

On Fri, Mar 20, 2015 at 3:42 PM, Nikhil Joshi <najo...@ucdavis.edu> wrote:

> Hi all,
>
> So it is time again for our next bioinformatics course using galaxy and I
> am trying to add some new tools to our custom galaxy running in the Amazon
> Cloud. I've installed the ncbi sra toolkit interface from the toolshed and
> the sra toolkit is installed on our AMI. However, when I upload an SRA file
> into our galaxy, the file is empty and I get this error:
>
> The uploaded binary file contains inappropriate content
>
> I am able to extract the fastq from the archive just fine on the command
> line, so I know it's not a problem with the file itself. Is there a
> solution to this?
>
> - Nik.
>
> --
> Nikhil Joshi
> Bioinformatics Analyst/Programmer
> UC Davis Bioinformatics Core
> http://bioinformatics.ucdavis.edu/
> najoshi -at- ucdavis -dot- edu
> 530.752.2698 (w)
>



-- 
Nikhil Joshi
Bioinformatics Analyst/Programmer
UC Davis Bioinformatics Core
http://bioinformatics.ucdavis.edu/
najoshi -at- ucdavis -dot- edu
530.752.2698 (w)
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