perfect - somehow overlooked that earlier.  thanks again for all the help.

-ben

On Wed, May 6, 2015 at 12:20 PM, John Chilton <jmchil...@gmail.com> wrote:

> blend4j and bioblend for the most part consumes "encoded ids" not
> UUIDs. The gist from yesterday demonstrates how to generate this
> encoded id from inside of Galaxy/Cheetah -
> https://gist.github.com/jmchilton/27c5bb05e155a611294d.
>
> UUIDs are newer (in Galaxy terms) than encoded ids and only a few
> endpoints (mostly related to workflows) currently are capable of
> consuming them. Lots of objects in Galaxy's models do not have UUIDS
> include both histories and hdas (the thing which output is).
>
> Hope this helps.
>
> -John
>
> On Wed, May 6, 2015 at 3:14 PM, Ben Bimber <bbim...@gmail.com> wrote:
> > Hello,
> >
> > I am working with blend4j and bioblend to interact with galaxy.  In
> general,
> > the API seems to require the UUID of a dataset/history, etc.  I may be
> > missing something obvious, but I am not finding great ways to obtain this
> > from cheetah substitutions.  For example, I can use ${history.id} or
> > ${output.id} to get the integer ID of that dataset/history.
> ${output.uuid}
> > is not recognized.
> >
> > I am looking here as a reference:
> >
> >
> https://github.com/galaxyproject/galaxy/blob/e73d90c94edc63d181c30bd1942918a960d3fac9/lib/galaxy/tools/wrappers.py
> >
> https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/model/__init__.py
> >
> > and would have expected UUID to get exposed in some manner.  Is there a
> > standard way to obtain the UUID?
> >
> > Thanks,
> > Ben
> >
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