Hi, I have noticed that Planemo (0.11.1) causes tests to fail if anything is written to sys.error.
For example if I test the following simple python: import sys if __name__ == '__main__': #sys.stderr.write("This is a test") print "Done" My test pass; But if I remove the comment: import sys if __name__ == '__main__': sys.stderr.write("This is a test") print "Done" The test fails! Is there a way to tell planemo that it is ok if the program writes to sys.error? Assuming of course a normal 0 exit as above. Without this it wuld be impossible to test any tool that wraps code that writes to sys.error such things as warning message up %done. Thanks in advance Christian Brenninkmeijer University of Manchester
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