You are almost certainly using the Huttenhower lab Galaxy instance
(http://huttenhower.sph.harvard.edu/galaxy/). I've CC's Curtis who can
hopefully direct you toward a solution.
On Wed, Jun 3, 2015 at 8:05 PM, Rebecca Prescott <rebec...@hawaii.edu> wrote:
> I am a new user of Galaxy, I believe I am working on the MAIN (although I am
> not sure). I would like to use the PICRUSt tool on Galaxy through the web.
> I have created an account, but I did not download Galaxy.
> I uploaded two .biom files generated in QIIME (see attached). The
> Greengenes reference database that was used to generate these OTU tables is
> greengenes/gg_12_10 version. On the web-based PICRUSt tool in Galaxy, I
> selected the only other option than the current Greengenes database, which
> is listed as May18 2012.
> When I try to run normalize_by_copy_number.py I get the following error
> return for both files:
> Traceback (most recent call last): File
> line 146, in <module> main() File “/net/rcstore02/ifs/rc_labs/galax
> I am at a loss as to what this error term means. I suspect it is a format
> issue? But not sure what the issue is or how to fix it. Or that I am using
> the gg_12_10 version?
> Rebecca Prescott, Ph.D
> University of Hawaii Manoa
> Department of Microbiology
> 2538 McCarthy Mall
> Honolulu, HI 96822
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Please keep all replies on the list by using "reply all"
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and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: