I have installed "package_r_ggplot2_0_9_3" in my galaxy instance as
dependency for "gatk2". The weird stuff is that in the web interface it
says the installation completed correctly but in the galaxy log file I get
As example, in the log file I get these errors:
ERROR: this R is version 2.11.0, package 'stringr' requires R >= 2.14
Error in loadNamespace(i, c(lib.loc, .libPaths())) :
there is no package called 'colorspac
ERROR: this R is version 2.11.0, package 'ggplot2' requires R >= 2.14
installation of package 'reshape2_1.2.2.tar.gz' had non-zero exit status
But at the end of the logfile I get this:
tool_shed.galaxy_install.install_manager DEBUG 2015-06-17 15:10:16,229
Changing status for tool dependency ggplot2 from Installing to
tool_shed.galaxy_install.install_manager DEBUG 2015-06-17 15:10:16,277
Tool dependency ggplot2 version 0.9.3 has been installed in
And in the webui it says the tool has been installed correctly (green).
Is this normal? can I ignore the errors or I should worry about them?
here you can see the complete log file when installing
thanks in advance for any advice.
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