Hi Bjoern

thanks for the reply. I previously did not find this in the API documentation 
but had a look now again 
(http://galaxy.readthedocs.org/en/master/api_doc.html#module-galaxy.webapps.galaxy.api
 
<http://galaxy.readthedocs.org/en/master/api_doc.html#module-galaxy.webapps.galaxy.api>)
 and found things have changed quite a bit (or did I miss something previously?)

I assume I need the lda_datasets module, but this does not contain an update 
functionality for the metadata (only for the permissions). An alternative would 
be the library_contents module which does have update but from the docs I’m not 
sure how to use this (e.g. what’s the trans parameter?). 

Any pointers to docs or examples?

greetz

Frederik

> On 20 Aug 2015, at 19:41, Bjoern Gruening <bjoern.gruen...@gmail.com> wrote:
> 
> Hi Frederik,
> 
> at least with the API this is possible!
> 
> Sorry for not being helpful at all!
> Bjoern
> 
> > Hi
> 
>       > 
> 
>       > is there a convenient way to change the genome build for a
>       lot of
> 
>       > files at once (e.g. a whole data library)?
> 
>       > 
> 
>       > I want to ‘update’ to a newer genome build and the only way I
>       found
> 
>       > is to go through ‘Edit information’ for each file separately.
>       I
> 
>       > assume it can be changed directly in the db, but I’m not
>       familiar
> 
>       > with the scheme.
> 
>       > 
> 
>       > thanks
> 
>       > 
> 
>       > Frederik
> 
>       > 
> 
>       >
>       ==================================================================
>       
> 
>       > Frederik Coppens, Ph.D. Project Leader Applied Bioinformatics
>       &
> 
>       > Biostatistics IT manager
> 
>       > 
> 
>       > Tel: 32 (0)9 3313812                          Fax:32 (0)9
>       3313809 VIB
> 
>       > DEPARTMENT OF PLANT SYSTEMS BIOLOGY, UGent Technologiepark
>       927, 9052
> 
>       > Gent, BELGIUM
> 
>       > 
> 
>       > fr...@psb.ugent.be <mailto:fr...@psb.ugent.be> 
> <mailto:fr...@psb.ugent.be> <mailto:fr...@psb.ugent.be>
> 
>       > http://www.psb.ugent.be/abb <http://www.psb.ugent.be/abb> 
> 
>       >
>       ==================================================================
> 
>       > 
> 
>       > 
> 
>       > 
> 
>       > ___________________________________________________________
>       Please
> 
>       > keep all replies on the list by using "reply all" in your
>       mail
> 
>       > client.  To manage your subscriptions to this and other
>       Galaxy lists,
> 
>       > please use the interface at: https://lists.galaxyproject.org/ 
> <https://lists.galaxyproject.org/>
> 
>       > 
> 
>       > To search Galaxy mailing lists use the unified search at: 
> 
>       > http://galaxyproject.org/search/mailinglists/ 
> <http://galaxyproject.org/search/mailinglists/>
> 

==================================================================
Frederik Coppens, Ph.D.
        Project Leader Applied Bioinformatics & Biostatistics
        IT manager

Tel: 32 (0)9 3313812                          Fax:32 (0)9 3313809
VIB DEPARTMENT OF PLANT SYSTEMS BIOLOGY, UGent
Technologiepark 927, 9052 Gent, BELGIUM

fr...@psb.ugent.be                         http://www.psb.ugent.be/abb
==================================================================

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to