I hope everyone is doing ok...
I'm in need of your help so badly it's a little bit urgent:
So my galaxy wasn't used in a while but the last time everything was working
1. The web-site was functional
2. The local handler upload the files locally on the master
3. Torque was shooting all the jobs correctly and getting an answer back.
But today, one of my students tried some typical trimmomatic and all his jobs
came back with the following error:
Job output not returned from cluster.
However, when I checked his datasets with that error, the view data (icon that
is an eye) had some results.
Also, when I looking inside the logs, I got:
Job output not returned from cluster: [Errno 2] No such file or directory:
But that file galaxy_406.o existed and had
TrimmomaticPE: Completed successfully
I tried changing the value from 0 to 5 of "retry_job_output_collection" in the
config/galaxy.ini file without any success.
I've look through the internet and I saw a lot of people had that error but no
one found a solution.
Can you guys please help?
Cordialement / Regards,
System Administrator (Linux)
Direction Générale des Technologies de l'Information et de la Communication
* Bur. : 1-514-343-6111 poste 16568
Université de Montréal
PAVILLON ROGER-GAUDRY, bureau X-218
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: