On Wed, Jan 20, 2016 at 2:22 PM, Floreline TOUCHARD
<floreline.touch...@gmail.com> wrote:
> Thanks for the answer !
> I compared the two versions of tools. It does not seem to be any major
> differences indeed. I added these tools to my instance successfully.

Great :)

> Additional options in version 6 are not to be integrate to my Galaxy
> instance immediately. I will update my XML file later if need arises. The
> old wrappers are perfect for the moment.

If you have any feedback on the IUC work, please comment on the
GitHub issue.

> For the NCBI BLAST+ suite I would like to select multiple databases only
> from the *.loc files. There is no spaces in the paths in my *.loc files
> (however there is spaces in the names of these databases, but I guess this
> is not a problem). I thought I just have to add a tag "multiple=true" in the
> XML file but it seems a bit more complex. Am I missing something ?

As far as I know, the multiple="true" tag only works on input datasets
from your history. But that would make sense... I don't think I have
ever tried this.

Even if that worked, the <command> tag would also need modifying
to account for the multiple values from db_opts.database.

Another potential option is to extend makeblastdb which can in
principle combine multiple FASTA and pre-existing databases...

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