Hello all, We're currently looking at changing our Galaxy setup to link user accounts with Linux user accounts for better cluster integration (running jobs as the actual user on SGE). As part of this, we've tried setting up a fresh installation on a new VM which has thrown up some issues.
First of all, what is the status of the old set_metadata_externally setting? This is described on the legacy documentation page as required under "Submitting Jobs as the Real User", https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster/Legacy Unfortunately, the same text is still present on the current page: https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster/ According to the GitHub search, set_metadata_externally no longer exists in the code or default settings files: https://github.com/galaxyproject/galaxy/search?q=set_metadata_externally I eventually tracked this down to the following commit, first included in Galaxy v13.06, back when the config file was universe_wsgi.ini rather than config/galaxy.ini, https://github.com/galaxyproject/galaxy/commit/68065e123800a5a2e700d636db9354702ac42fe5 So, can we assume that metadata is now always set externally, and should the wiki be updated accordingly? Thanks, Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
