Hi Brian,
what release of Galaxy are you using? If it's release_15.07 or earlier from Bitbucket, please move to GitHub and update to the latest release_15.07 or (better) to release_15.10 .


For more information, read this thread: http://dev.list.galaxyproject.org/Bismark-installation-dependencies-error-td4668186.html

Cheers,
Nicola

On 28/01/16 18:23, Aevermann, Brian wrote:
Hello,

I am having troubles installing Trimmomatic on my local galaxy on my mac 10.10.03. After following the instructions on the public tool shed and I end up to an tool dependency installation error for the Trimmomatic 0.32 package. The error is below. It appears that the installer is looking for the folder listed; however, the a folder does exist with only one Trimmomatic-0.32 subfolder, not two. Please advise.

Thanks!

Brian Aevermann

[Errno 2] No such file or directory: 
'./database/tmp/tmp-toolshed-mtdHb41Oo/Trimmomatic-0.32/Trimmomatic-0.32/'



___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
   https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
   http://galaxyproject.org/search/mailinglists/

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to