Hi Dannon,
I got this error with a detail view (/api/quotas/f597429621d6eb2b) when
the quota has associated users with a disk usage different of 0,
total_disk_usage in the user dictionary is a Decimal object and is not
serializable.
I worked on it this afternoon, it's possible to correct it just by
adding the key 'total_disk_usage' in the value_mapper of the show method
of QuotaAPIController class like the show method of UserAPIController class.
I join a patch for the quota.py file with this email
I can propose a pull request if you want.
Best,
--
Fabien Mareuil | Centre d'Informatique pour la Biologie
fabien.mare...@pasteur.fr <mailto:fabien.mare...@pasteur.fr> | Institut
Pasteur
25,28 rue du Docteur Roux 75015 Paris, France
Le 08/03/2016 16:24, Dannon Baker a écrit :
Hi Fabien,
I'm having trouble reproducing this error on my side. In the trace it
looks like the error is being thrown at the collection view
(/api/quotas) and not the detail view (/api/quotas/f597429621d6eb2b or
the like). Is that true?
Can you show me the exact configuration of this quota in the admin panel?
On Tue, Mar 8, 2016 at 8:10 AM, Fabien Mareuil <fmare...@pasteur.fr
<mailto:fmare...@pasteur.fr>> wrote:
Hi,
We got an error when we used API to see a quota detail, we get the
following traceback:
157.99.60.167 - - [08/Mar/2016:10:13:58 +0200] "GET /api/quotas
HTTP/1.1" 200 - "-" "Mozilla/5.0 (X11; Ubuntu; Linux x86_64;
rv:44.0) Gecko/20100101 Firefox/44.0"
galaxy.web.framework.decorators ERROR 2016-03-08 10:14:10,273
Uncaught exception in exposed API method:
Traceback (most recent call last):
File ".../lib/galaxy/web/framework/decorators.py", line 142, in
decorator
rval = dumps( rval, indent=4, sort_keys=True )
File ".../lib/galaxy/util/json.py", line 65, in safe_dumps
dumped = json.dumps( *args, allow_nan=False, **kwargs )
File "/usr/lib64/python2.6/json/__init__.py", line 237, in dumps
**kw).encode(obj)
File "/usr/lib64/python2.6/json/encoder.py", line 367, in encode
chunks = list(self.iterencode(o))
File "/usr/lib64/python2.6/json/encoder.py", line 309, in
_iterencode
for chunk in self._iterencode_dict(o, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 275, in
_iterencode_dict
for chunk in self._iterencode(value, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 306, in
_iterencode
for chunk in self._iterencode_list(o, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 204, in
_iterencode_list
for chunk in self._iterencode(value, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 309, in
_iterencode
for chunk in self._iterencode_dict(o, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 275, in
_iterencode_dict
for chunk in self._iterencode(value, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 309, in
_iterencode
for chunk in self._iterencode_dict(o, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 275, in
_iterencode_dict
for chunk in self._iterencode(value, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 317, in
_iterencode
for chunk in self._iterencode_default(o, markers):
File "/usr/lib64/python2.6/json/encoder.py", line 323, in
_iterencode_default
newobj = self.default(o)
File "/usr/lib64/python2.6/json/encoder.py", line 344, in default
raise TypeError(repr(o) + " is not JSON serializable")
TypeError: Decimal('856488698767') is not JSON serializable
json can't serialize Decimal object.
I tested it with simplejson and it works.
An other solution is to convert the Decimal object to a float
before the dumps.
Thanks a lot for your help
Best regards,
--
Fabien Mareuil | Centre d'Informatique pour la Biologie
fabien.mare...@pasteur.fr <mailto:fabien.mare...@pasteur.fr> |
Institut Pasteur
25,28 rue du Docteur Roux 75015 Paris, France
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--- lib/galaxy/webapps/galaxy/api/quotas_orig.py 2016-03-08 17:27:03.235186824 +0100
+++ lib/galaxy/webapps/galaxy/api/quotas.py 2016-03-08 17:27:53.339187785 +0100
@@ -50,7 +50,7 @@
Displays information about a quota.
"""
quota = self.get_quota( trans, id, deleted=util.string_as_bool( deleted ) )
- return quota.to_dict( view='element', value_mapper={ 'id': trans.security.encode_id } )
+ return quota.to_dict( view='element', value_mapper={ 'id': trans.security.encode_id, 'total_disk_usage': float } )
@web.expose_api
@web.require_admin
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