All,

>From my read of the command line docs for ANNOVAR I believe that the
program needs so ancillary files for its operation (e.g. GenePred file,
transcripts fasta file, etc...).

Does anyone have any experience deploying custom genomes in Galaxy for use
with ANNOVAR? Specifically what files need to go where in order to enable
the Galaxy ANNOVAR front end?

Thanks,

David
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