> I’m trying to put together a tool + dependency package to use umi-tools
> (https://github.com/CGATOxford/UMI-tools) from Galaxy.
> I’m at a loss on how I should organise this.
> The package is available from either github or pip. Which one is preferable
> to use? How do I make sure the package dependencies are installed? I’ve
> found the <action type="download_by_url”> and <action
> type=“create_virtualenv”> actions, but I’m not really sure that’s the way to
> go. I havent found any real resources on how to build package dependencies
> Any help? Now, approaching it by downloading the package from github with
> <action type="download_by_url”> and installing it with <action
> type="shell_command">python setup.py install</action>. This, however, tries
> to install the package to /usr/bin/ which isn’t desirable (obviously).
> Thanks a lot!
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: