> > Hi > > I’m trying to put together a tool + dependency package to use umi-tools > (https://github.com/CGATOxford/UMI-tools) from Galaxy. > I’m at a loss on how I should organise this. > > The package is available from either github or pip. Which one is preferable > to use? How do I make sure the package dependencies are installed? I’ve > found the <action type="download_by_url”> and <action > type=“create_virtualenv”> actions, but I’m not really sure that’s the way to > go. I havent found any real resources on how to build package dependencies > either. > > Any help? Now, approaching it by downloading the package from github with > <action type="download_by_url”> and installing it with <action > type="shell_command">python setup.py install</action>. This, however, tries > to install the package to /usr/bin/ which isn’t desirable (obviously). > > Thanks a lot! > M >
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
