I think you will need to look at the Galaxy logs for some clues about if the dependencies are being found or not. The simple "hack" is to install them on the $PATH manually, which would be the practical solution if this is urgent.
Peter On Fri, Aug 5, 2016 at 3:09 PM, Rathert, Philipp, Dr. <philipp.rath...@ibc.uni-stuttgart.de> wrote: > Yes I did. > All tools are installed and I see no error message. > > Philipp ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/